Acme missing after changing server type from Database to App server

I had a VM connected as Database Server initially.

Later I needed to add sites on the VM. To do that, I first “forgot” the server, and then connected again as App Server.

Most configurations succeeded until I issued SSL. It failed. On some digging, I found that the acme was not installed on /root/.acme.sh/acme.sh

Is there some recommended way to handle this case? Will I be missing other dependencies too? If I were to install acme manually, will it work with cleavr dashboard?